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Author Dukhovskoy, D.S., Leben, R.R., Chassignet, E.P., Hall, C.A., Morey, S.L., Nedbor-Gross, R.
Title Characterization of the uncertainty of loop current metrics using a multidecadal numerical simulation and altimeter observations Type Journal Article
Year 2015 Publication Deep Sea Research Part I: Oceanographic Research Papers Abbreviated Journal
Volume 100 Issue 0 Pages (up) 140-158
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Eddies and mesoscale processes, Gulf of Mexico, Loop Current, Satellite altimetry, Ocean modeling, Ocean front detection
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ISSN 0967-0637 ISBN Medium
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Author Androulidakis, Y.S.; Kourafalou, V.H.
Title On the processes that influence the transport and fate of Mississippi waters under flooding outflow conditions Type Journal Article
Year 2013 Publication Ocean Dynamics Abbreviated Journal Ocean Dynamics
Volume 63 Issue 2-3 Pages (up) 143-164
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Mississippi River; Buoyant plume; River flood; Northern Gulf of Mexico; Numerical modeling; HYCOM
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Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1616-7341 ISBN Medium
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Author Zavala-Romero, O.; Ahmed, A.; Chassignet, E.P.; Zavala-Hidalgo, J.; Eguiarte, A.F.; Meyer-Base, A.
Title An open source Java web application to build self-contained web GIS sites Type Journal Article
Year 2014 Publication Environmental Modelling & Software Abbreviated Journal
Volume 62 Issue 2014 Pages (up) 210-220
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Web GIS, Open geospatial consortium, OpenLayers, GeoServer, ncWMS, GIS, NetCDF
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Author Quintana-Rizzo, E., Torres, J.J., Ross, S.W., Romero, I.C., Watson, K., Goddard, E., Hollander, D.
Title δ13C and δ15N in deep-living fishes and shrimps after the Deepwater Horizon oil spill, Gulf of Mexico Type Journal Article
Year 2015 Publication Marine Pollution Bulletin Abbreviated Journal Marine Pollution Bulletin
Volume 94 Issue 1-2 Pages (up) 241-250
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Deepwater Horizon; Gulf of Mexico; Mesopelagic fauna; Oil spill; Stable isotopes
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Author Radovic, J.R.; Aeppli, C.; Nelson, R.K.; Jimenez, N.; Reddy, C.M.; Bayona, J.M.; Albaiges, J.
Title Assessment of photochemical processes in marine oil spill fingerprinting Type Journal Article
Year 2014 Publication Marine Pollution Bulletin Abbreviated Journal Marine Pollution Bulletin
Volume 79 Issue 1-2 Pages (up) 268-277
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Photooxidation; Oil spills; Oil fingerprinting; Polycyclic aromatic hydrocarbons; Triaromatic steranes
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ISSN 0025326X ISBN Medium
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Author Canion, A.; Kostka, J.E.; Gihring, T.M.; Huettel, M.; van Beusekom, J.E.E.; Gao, H.; Lavik, G.; Kuypers, M.M.M.
Title Temperature response of denitrification and anammox reveals the adaptation of microbial communities to in situ temperatures in permeable marine sediments that span 50° in latitude Type Journal Article
Year 2014 Publication Biogeosciences Abbreviated Journal Biogeosciences
Volume 11 Issue 2 Pages (up) 309-320
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1726-4189 ISBN Medium
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Author Zavala Hidalgo, J; Romero-Centeno, R; Mateos-Jasso, A; Morey, SL; Martínez-Lopez, B
Title The response of the Gulf of Mexico to wind and heat flux forcing: What has been learned in recent years? Type Journal Article
Year 2014 Publication Atmosfera Abbreviated Journal Atmosfera
Volume 27 Issue 3 Pages (up) 317-334
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Gulf of Mexico; surface fluxes
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Author Canion, A.; Kostka, J.E.; Gihring, T.M.; Huettel, M.; van Beusekom, J.E.E.; Gao, H.; Lavik, G.; Kuypers, M.M.M.
Title Corrigendum to “Temperature response of denitrification and anammox reveals the adaptation of microbial communities to in situ temperatures in permeable marine sediments that span 50° in latitude” published in Biogeosciences, 11, 309-320, 2014 Type Journal Article
Year 2014 Publication Biogeosciences Abbreviated Journal Biogeosciences
Volume 11 Issue 2 Pages (up) 461-462
Deep-C Funded yes GoMRI Funding yes Peer Reviewed no
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ISSN 1726-4189 ISBN Medium
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Author Kostka, J.E.; Teske, A.; Joye, S.B.; Head, I.M.
Title The metabolic pathways and environmental controls of hydrocarbon biodegradation in marine ecosystems Type Journal Article
Year 2014 Publication Frontiers in Microbiology Abbreviated Journal Front. Microbiol.
Volume 5 Issue Pages (up) Article 471
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Koolen, H.F., Swarthout, R.F., Nelson, R.K., Chen, H., Krajewski, L.C., Aeppli, C., McKenna, A.M., Rodgers, R.P., Reddy, C.M.
Title Unprecedented insights into the chemical complexity of coal tar from comprehensive two-dimensional gas chromatography mass spectroscopy and Fourier transform ion cyclotron resonance mass spectrometry Type Journal Article
Year 2015 Publication Energy and Fuels Abbreviated Journal Energy Fuels
Volume 29 Issue 2 Pages (up) 641-648
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0887-0624 ISBN Medium
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Author Putland, J.N.; Mortazavi, B.; Iverson, R.L.; Wise, S.W.
Title Phytoplankton Biomass and Composition in a River-Dominated Estuary During Two Summers of Contrasting River Discharge Type Journal Article
Year 2014 Publication Estuaries and Coasts Abbreviated Journal Estuaries and Coasts
Volume 37 Issue Pages (up) 664-679
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author White, H.K.; Xu, L.; Hartmann, P.; Quinn, J.G.; Reddy, C.M.
Title Unresolved Complex Mixture (UCM) in Coastal Environments Is Derived from Fossil Sources Type Journal Article
Year 2013 Publication Environmental Science & Technology Abbreviated Journal Environ. Sci. Technol.
Volume 47 Issue 2 Pages (up) 726-731
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0013-936X ISBN Medium
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Author Joye, SB; Teske, AP; Kostka, JE
Title Microbial dynamics following the Macondo oil well blowout across Gulf of Mexico environments Type Journal Article
Year 2014 Publication Bioscience Abbreviated Journal Bioscience
Volume 64 Issue 9 Pages (up) 766
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords oil, hydrocarbon degradation, methane, microbial communities, metagenomics
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Author Veríssimo, A., Cotton, C., Burgess, G., Buch, R., Guallart, J.
Title Species diversity of the deep-water gulper sharks (Squaliformes: Centrophoridae: Centrophorus) in North Atlantic waters – current status and taxonomic issues Type Journal Article
Year 2014 Publication Zoological Journal of the Linnean Society Abbreviated Journal
Volume 172 Issue 4 Pages (up) 803-830
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords alpha taxonomy;dichotomous key;dogfishes;molecular genetics;morphometrics;squaloid
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Author Dong, C; Petro, D; Pomerantz, A.E; Nelson, RK; Latifzai, AS; Nouvelle, X; Zuo, J; Reddy, CM; Mullins, OC
Title New thermodynamic modeling of reservoir crude oil Type Journal Article
Year 2014 Publication Fuel Abbreviated Journal Fuel
Volume 117 Issue A Pages (up) 839-850
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Asphaltene gradients, Reservoir connectivity, Asphaltenes, Flory–Huggins–Zuo equation of state, Yen–Mullins model
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Author Chanton, J., Zhao, T., Rosenheim, B.E., Joye, S., Bosman, S., Brunner, C., Yeager, C.M., Diercks, A.R., Hollander, D.
Title Using Natural Abundance Radiocarbon To Trace the Flux of Petrocarbon to the Seafloor Following the Deepwater Horizon Oil Spill Type Journal Article
Year 2015 Publication Environmental Science & Technology Abbreviated Journal Environ. Sci. Technol.
Volume 49 Issue Pages (up) 847-854
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Deepwater Horizon, radiocarbon analysis, petrocarbon
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Author Winokur, J; Conrad, P; Sraj, I; Knio, O; Srinivasan, A; Thacker, WC; Marzouk, Y; Iskandarani, M
Title A priori testing of sparse adaptive polynomial chaos expansions using an ocean general circulation model database Type Journal Article
Year 2013 Publication Computational Geosciences Abbreviated Journal Computat. Geosci.
Volume 17 Issue 6 Pages (up) 899-911
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Uncertainty quantification; Polynomial chaos; Sparse Smolyak quadrature; Adaptive sampling; Ocean modeling
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Author Sraj, I.; Iskandarani, M.; Thacker, W.C.; Srinivasan, A.; Knio, O.M.
Title Drag Parameter Estimation Using Gradients and Hessian from a Polynomial Chaos Model Surrogate Type Journal Article
Year 2014 Publication Monthly Weather Review Abbreviated Journal Mon. Wea. Rev.
Volume 142 Issue 2 Pages (up) 933-941
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Atmosphere-ocean interaction; Hurricanes; Ocean circulation; Bayesian methods; Inverse methods; Optimization
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Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0027-0644 ISBN Medium
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Author Overholt, W.A.; Green, S.J.; Marks, K.P.; Venkatraman, R.; Prakash, O.; Kostka, J.E.
Title Draft Genome Sequences for Oil-Degrading Bacterial Strains from Beach Sands Impacted by the Deepwater Horizon Oil Spill Type Journal Article
Year 2013 Publication Genome Announcements Abbreviated Journal Genome Announcements
Volume 1 Issue 6 Pages (up) e01015-13
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Series Editor Series Title Abbreviated Series Title
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ISSN 2169-8287 ISBN Medium
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Author Aeppli, C.; Nelson, R.K.; Carmichael, C.A.; Valentine, D.L.; Reddy, C.M.
Title Biotic and abiotic oil degradation after the Deepwater Horizon disaster leads to formation of recalcitrant oxygenated hydrocarbons: New insights using GCxGC Type Conference Article
Year 2014 Publication International Oil Spill Conference Proceedings Abbreviated Journal IOSC Conference Proceedings
Volume 2014 Issue 1 Pages (up) 1087-1098
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Uhlhorn, E; Shay, LK
Title Loop Current mixed layer response to hurricane Lili (2002) Part II: Modeling results Type Journal Article
Year 2013 Publication Journal of Physical Oceanography Abbreviated Journal J. Phys. Oceanogr.
Volume 43 Issue 6 Pages (up) 1173-1192
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Currents; Hurricanes; Atmosphere-ocean interaction; Hurricanes/typhoons; Ocean models
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Author Rohrs, J.; Hakon Christensen, K.; Vikebo, F.; Sundby, S.; Saetra, O.; Brostrom, G.
Title Wave-induced transport and vertical mixing of pelagic eggs and larvae Type Journal Article
Year 2014 Publication Limnology and Oceanography Abbreviated Journal Limnol. Oceangr.
Volume 59 Issue 4 Pages (up) 1213-1227
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Series Editor Series Title Abbreviated Series Title
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ISSN 0024-3590 ISBN Medium
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Author Podgorski, D.C.; Corilo, Y.E.; Nyadong, L.; Lobodin, V.V.; Bythell, B.J.; Robbins, W.K.; McKenna, A.M.; Marshall, A.G.; Rodgers, R.P.
Title Heavy Petroleum Composition. 5. Compositional and Structural Continuum of Petroleum Revealed Type Journal Article
Year 2013 Publication Energy & Fuels Abbreviated Journal Energy Fuels
Volume 27 Issue 3 Pages (up) 1268-1276
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0887-0624 ISBN Medium
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Author Schiller, R.V.; Kourafalou, V.H.
Title Loop Current Impact on the Transport of Mississippi River Waters Type Journal Article
Year 2014 Publication Journal of Coastal Research Abbreviated Journal Journal of Coastal Research
Volume 30 Issue 6 Pages (up) 1287-1306
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Northern Gulf of Mexico, HYCOM, numerical modeling, eddy entrainment, Mississippi River plume
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Author Rohrs, J; Christensen, KH; Hole, LR
Title Observation based evaluation of surface wave effects on trajectory forecasts Type Journal Article
Year 2012 Publication Ocean Dynamics Abbreviated Journal
Volume 62 Issue 10-12 Pages (up) 1519-1533
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Wave-current interactions; Trajectory forecasts; Surface drifters; iSphere; Wave effects
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A long-term, interdisciplinary study of deep sea to coast connectivity in the northeastern Gulf of Mexico.

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