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Author Zhu, J.; Weisberg, R.H.; Zheng,L.; Han, S.
Title (up) Influences of channel deepening and widening on the tidal and non-tidal circulation of Tampa Bay Type Journal Article
Year 2014 Publication Estuaries and Coasts Abbreviated Journal
Volume in press Issue Pages
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Zheng, Y; Bourassa, MA; Hughes, PJ
Title (up) Influences of Sea Surface Temperature Gradients and Surface Roughness Changes on the Motion of Surface Oil: A Simple Idealized Study Type Journal Article
Year 2013 Publication Journal of Applied Meteorology and Climatology Abbreviated Journal J. Appl. Meteor. Clim.
Volume 52 Issue 7 Pages 1561-1575
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Oil Slick; roughness; temperature gradient; secondary circulation; idealized
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Author Nedbor-Gross, R., Dukhovskoy, D.S., Bourassa, M.A., Morey, S.M., Chassignet, E.P.
Title (up) Investigation of the Relationship Between the Yucatan Channel Transport and the Loop Current Area in a Multidecadel Numerical Simulation Type Journal Article
Year 2014 Publication Marine Technology Society Journal Abbreviated Journal mar technol soc j
Volume 48 Issue 4 Pages 15-26
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Juyal, P.; McKenna, A.M.; Fan, T.; Cao, T.; Rueda-Velasquez, R.I.; Fitzsimmons, J.E.; Yen, A.; Rodgers, R.P.; Wang, J.; Buckley, J.S.; Gray, M.R.; Allenson, S.J.; Creek, J.
Title (up) Joint Industrial Case Study for Asphaltene Deposition Type Journal Article
Year 2013 Publication Energy & Fuels Abbreviated Journal Energy Fuels
Volume 27 Issue 4 Pages 1899-1908
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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ISSN 0887-0624 ISBN Medium
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Author Schiller, R.V.; Kourafalou, V.H.
Title (up) Loop Current Impact on the Transport of Mississippi River Waters Type Journal Article
Year 2014 Publication Journal of Coastal Research Abbreviated Journal Journal of Coastal Research
Volume 30 Issue 6 Pages 1287-1306
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Northern Gulf of Mexico, HYCOM, numerical modeling, eddy entrainment, Mississippi River plume
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Author Uhlhorn, E; Shay, LK
Title (up) Loop Current mixed layer response to hurricane Lili (2002) Part II: Modeling results Type Journal Article
Year 2013 Publication Journal of Physical Oceanography Abbreviated Journal J. Phys. Oceanogr.
Volume 43 Issue 6 Pages 1173-1192
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Currents; Hurricanes; Atmosphere-ocean interaction; Hurricanes/typhoons; Ocean models
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Author Marshall, A. G.; Blakney, G. T.; Chen, T.; Kaiser, N. K.; McKenna, A. M.; Rodgers, R. P.; Ruddy, B. M.; Xian, F.
Title (up) Mass Resolution and Mass Accuracy: How Much Is Enough? Type Journal Article
Year 2013 Publication Mass Spectrometry Abbreviated Journal Mass Spectrometry
Volume 2 Issue Special_Issue Pages S0009-S0009
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Fourier transform; ion cyclotron resonance; FTMS; isotopic fine structure
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ISSN 2187-137X ISBN Medium
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Author Joye, SB; Teske, AP; Kostka, JE
Title (up) Microbial dynamics following the Macondo oil well blowout across Gulf of Mexico environments Type Journal Article
Year 2014 Publication Bioscience Abbreviated Journal Bioscience
Volume 64 Issue 9 Pages 766
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords oil, hydrocarbon degradation, methane, microbial communities, metagenomics
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Author King, GM; Kostka, JE; Hazen, T; Sobecky, P
Title (up) Microbial Responses to the Deepwater Horizon Oil Spill: From Coastal Wetlands to the Deep Sea Type Journal Article
Year 2014 Publication Annual Reviews of Marine Science Abbreviated Journal Ann Rev Mar Sci
Volume 7 Issue 15 Pages 1-15
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords oil, hydrocarbon degradation, methane, microbial communities, metagenomics
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Author Zheng, L.; Weisberg, R.H.
Title (up) Modeling the west Florida coastal ocean by downscaling from the deep ocean, across the continental shelf and into the estuaries Type Journal Article
Year 2012 Publication Ocean Modelling Abbreviated Journal Ocean Modelling
Volume 48 Issue Pages 10-29
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Coastal ocean circulation; Nested models; West Florida continental shelf; FVCOM; Global HYCOM
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Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1463-5003 ISBN Medium
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Author Lemkau, K.L.; McKenna, A.M.; Podgorski, D.C.; Rodgers, R.P.; Reddy, C.M.
Title (up) Molecular Evidence of Heavy-Oil Weathering Following the M/V Cosco Busan Spill: Insights from Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Type Journal Article
Year 2014 Publication Environmental Science & Technology Abbreviated Journal Environ. Sci. Technol.
Volume 48 Issue 7 Pages 3760-3767
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0013-936X ISBN Medium
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Author Maksimova, EV; Clarke, AJ
Title (up) Multiyear Subinertial and Seasonal Eulerian Current Observations near the Florida Big Bend Coast Type Journal Article
Year 2013 Publication Journal of Physical Oceanography Abbreviated Journal J. Phys. Oceanogr.
Volume 43 Issue 8 Pages 1691-1709
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Coastal flows; Currents; Ocean dynamics; Shallow-water equations; Transport; Waves; oceanic
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Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0022-3670 ISBN Medium
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Author Dong, C; Petro, D; Pomerantz, A.E; Nelson, RK; Latifzai, AS; Nouvelle, X; Zuo, J; Reddy, CM; Mullins, OC
Title (up) New thermodynamic modeling of reservoir crude oil Type Journal Article
Year 2014 Publication Fuel Abbreviated Journal Fuel
Volume 117 Issue A Pages 839-850
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Asphaltene gradients, Reservoir connectivity, Asphaltenes, Flory–Huggins–Zuo equation of state, Yen–Mullins model
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Author Nguyen, T.-T., Morey, S.L., Dukhovskoy, D.S., Chassignet , E.P.
Title (up) Nonlocal impacts of the Loop Current on crossslope near-bottom flow in the northeastern Gulf of Mexico Type Journal Article
Year 2015 Publication Geophysical Research Letters Abbreviated Journal Geophys. Res. Lett.
Volume In Press Issue Pages
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Fabregat, A.; Dewar, W.K.; OzgokmenT.M.; Poje, A.C.; Wienders, N.
Title (up) Numerical Simulations of Turbulent Thermal, Bubble and Hybrid Plumes Type Journal Article
Year 2015 Publication Ocean Modelling Abbreviated Journal Ocean Modelling
Volume ACCEPTED Issue Pages
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Rohrs, J; Christensen, KH; Hole, LR
Title (up) Observation based evaluation of surface wave effects on trajectory forecasts Type Journal Article
Year 2012 Publication Ocean Dynamics Abbreviated Journal
Volume 62 Issue 10-12 Pages 1519-1533
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Wave-current interactions; Trajectory forecasts; Surface drifters; iSphere; Wave effects
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Author Garcia-Pineda, O., MacDonald, I. R., Li, X., Jackson, C. R., & Pichel, W. G.
Title (up) Oil Spill Mapping and Measurement in the Gulf of Mexico With Textural Classifier Neural Network Algorithm (TCNNA) Type Journal Article
Year 2013 Publication IEEE J. Sel. Top. Appl. Earth Observations Remote Sensing Abbreviated Journal IEEE J. Sel. Top. Appl. Earth Observations Remote Sensing
Volume 6 Issue 6 Pages 2517–2525
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Corilo, Y.E.; Podgorski, D.C.; McKenna, A.M.; Lemkau, K.L.; Reddy, C.M.; Marshall, A.G.; Rodgers, R.P.
Title (up) Oil Spill Source Identification by Principal Component Analysis of Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectra Type Journal Article
Year 2013 Publication Analytical Chemistry Abbreviated Journal Anal. Chem.
Volume 85 Issue 19 Pages 9064-9069
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0003-2700 ISBN Medium
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Author Aeppli, C.; Carmichael, C.A.; Nelson, R.K.; Lemkau, K.L.; Graham, W.M.; Redmond, M.C.; Valentine, D.L.; Reddy, C.M.
Title (up) Oil Weathering after the Deepwater Horizon Disaster Led to the Formation of Oxygenated Residues Type Journal Article
Year 2012 Publication Environmental Science & Technology Abbreviated Journal Environ. Sci. Technol.
Volume 46 Issue 16 Pages 8799-8807
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Series Editor Series Title Abbreviated Series Title
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ISSN 0013-936X ISBN Medium
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Author Zhu, J.; Weisberg, R.H.; Zheng, L.; Han, S.
Title (up) On the flushing of Tampa Bay Type Journal Article
Year 2014 Publication Estuaries and Coasts Abbreviated Journal
Volume Issue Pages
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Androulidakis, Y.S.; Kourafalou, V.H.
Title (up) On the processes that influence the transport and fate of Mississippi waters under flooding outflow conditions Type Journal Article
Year 2013 Publication Ocean Dynamics Abbreviated Journal Ocean Dynamics
Volume 63 Issue 2-3 Pages 143-164
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Mississippi River; Buoyant plume; River flood; Northern Gulf of Mexico; Numerical modeling; HYCOM
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ISSN 1616-7341 ISBN Medium
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Author Huettel, M
Title (up) Oxygen Dynamics around Buried Tar Balls in Florida Marine Sands: A laboratory flume study testing the VisiSens oxygen imaging system Type Magazine Article
Year 2012 Publication PreSense Precision Sensing Abbreviated Journal
Volume Issue Pages
Deep-C Funded yes GoMRI Funding yes Peer Reviewed no
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Author Hall, G.J.; Frysinger, G.S.; Aeppli, C.; Carmichael, C.A.; Gros, J.; Lemkau, K.L.; Nelson, R.K.; Reddy, C.M.
Title (up) Oxygenated weathering products of Deepwater Horizon oil come from surprising precursors Type Journal Article
Year 2013 Publication Marine Pollution Bulletin Abbreviated Journal Marine Pollution Bulletin
Volume 75 Issue 1-2 Pages 140-149
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Photo-oxidation; Biodegradation; Oxygenated hydrocarbons; Chemometrics; Partial least squares; Comprehensive two-dimensional gas chromatography
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ISSN 0025326X ISBN Medium
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Author Snyder, RA; Vestal, A; Barnes, G; Pelot, R; Ederington-Hagy, M; Hileman, F
Title (up) PAH concentrations in Coquina (Donax spp.) on a sandy beach shoreline impacted by a marine oil spill Type Journal Article
Year 2014 Publication Marine Pollution Bulletin Abbreviated Journal
Volume 83 Issue 1 Pages 87-91
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
Keywords Donax, PAH, Indicator, Beach
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Author Romero, IC; Schwing, PT; Larson, RA; Brooks, GR; Hastings, DW; Hollander, DJ
Title (up) Petroleum hydrocarbons deposition in the deep-sea sediments of the Northern Gulf of Mexico following the 2010 Deepwater Horizon Blowout Event: Compositions and Consequences Type Journal Article
Year 2013 Publication Deep Sea Research Abbreviated Journal
Volume in review Issue Pages
Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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A long-term, interdisciplinary study of deep sea to coast connectivity in the northeastern Gulf of Mexico.

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