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Author Lewis, A.T.; Tekavec, T.N.; Jarvis, J.M.; Juyal, P.; McKenna, A.M.; Yen, A.T.; Rodgers, R.P. edit  url
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  Title Evaluation of the Extraction Method and Characterization of Water-Soluble Organics from Produced Water by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Type Journal Article
  Year 2013 Publication Energy & Fuels Abbreviated Journal Energy Fuels  
  Volume 27 Issue 4 Pages 1846-1855  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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  ISSN 0887-0624 ISBN Medium  
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Author Kekalainen, T.; Pakarinen, J.M.H.; Wickstrom, K.; Lobodin, V.V.; McKenna, A.M.; Janis, J. edit  url
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  Title Compositional Analysis of Oil Residues by Ultrahigh-Resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Type Journal Article
  Year 2013 Publication Energy & Fuels Abbreviated Journal Energy Fuels  
  Volume 27 Issue 4 Pages 2002-2009  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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  ISSN 0887-0624 ISBN Medium  
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Author Podgorski, D.C.; Corilo, Y.E.; Nyadong, L.; Lobodin, V.V.; Bythell, B.J.; Robbins, W.K.; McKenna, A.M.; Marshall, A.G.; Rodgers, R.P. edit  url
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  Title Heavy Petroleum Composition. 5. Compositional and Structural Continuum of Petroleum Revealed Type Journal Article
  Year 2013 Publication Energy & Fuels Abbreviated Journal Energy Fuels  
  Volume 27 Issue 3 Pages 1268-1276  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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  ISSN 0887-0624 ISBN Medium  
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Author Headley, J.V.; Peru, K.M.; Mohamed, M.H.; Wilson, L.; McMartin, D.W.; Mapolelo, M.M.; Lobodin, V.V.; Rodgers, R.P.; Marshall, A.G. edit  url
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  Title Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Characterization of Tunable Carbohydrate-Based Materials for Sorption of Oil Sands Naphthenic Acids Type Journal Article
  Year 2013 Publication Energy & Fuels Abbreviated Journal Energy Fuels  
  Volume 27 Issue 4 Pages 1772-1778  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Corilo, Y.E.; Podgorski, D.C.; McKenna, A.M.; Lemkau, K.L.; Reddy, C.M.; Marshall, A.G.; Rodgers, R.P. edit  url
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  Title Oil Spill Source Identification by Principal Component Analysis of Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectra Type Journal Article
  Year 2013 Publication Analytical Chemistry Abbreviated Journal Anal. Chem.  
  Volume 85 Issue 19 Pages 9064-9069  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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  ISSN 0003-2700 ISBN Medium  
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Author Lobodin, V.V.; Juyal, P.; McKenna, A.M.; Rodgers, R.P.; Marshall, A.G. edit  url
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  Title Tetramethylammonium Hydroxide as a Reagent for Complex Mixture Analysis by Negative Ion Electrospray Ionization Mass Spectrometry Type Journal Article
  Year 2013 Publication Analytical Chemistry Abbreviated Journal Anal. Chem.  
  Volume 85 Issue 16 Pages 7803-7808  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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  ISSN 0003-2700 ISBN Medium  
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Author Christensen, K.H.; Rohrs, J.; Ward, B.; Fer, I.; Brostrom, G.; Saetra, O.; Breivik, O. edit  url
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  Title Surface wave measurements using a ship-mounted ultrasonic altimeter Type Journal Article
  Year 2013 Publication Methods in Oceanography Abbreviated Journal Methods in Oceanography  
  Volume 6 Issue Pages 1-15  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Surface waves; in-situ measurements; Ultrasonic altimeter  
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  Series Volume Series Issue Edition  
  ISSN 2211-1220 ISBN Medium  
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Author Weisberg, R.H.; Zheng, L.; Liu, Y.; Lembke, C.; Lenes, J.M.; Walsh, J.J. edit  url
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  Title Why no red tide was observed on the West Florida Continental Shelf in 2010 Type Journal Article
  Year 2014 Publication Harmful Algae Abbreviated Journal Harmful Algae  
  Volume in press Issue Pages  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords K. brevis red tide; Anomalous upwelling; Shelf water properties  
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  ISSN 1568-9883 ISBN Medium  
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Author Zhao, J.; Hu, C.; Lenes, J.M.; Weisberg, R.H.; Lembke, C.; English, D.; Wolny, J.; Zheng, L.; Walsh, J.J.; Kirkpatrick, G. edit  url
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  Title Three-dimensional structure of a Karenia brevis bloom: Observations from gliders, satellites, and field measurements Type Journal Article
  Year 2013 Publication Harmful Algae Abbreviated Journal Harmful Algae  
  Volume 29 Issue Pages 22-30  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords FVCOM model; Glider; Harmful algal blooms (HABs); Karenia brevis; Remote sensing; Upwelling  
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  ISSN 1568-9883 ISBN Medium  
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Author Zheng, L.; Weisberg, R.H. edit  url
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  Title Modeling the west Florida coastal ocean by downscaling from the deep ocean, across the continental shelf and into the estuaries Type Journal Article
  Year 2012 Publication Ocean Modelling Abbreviated Journal Ocean Modelling  
  Volume 48 Issue Pages 10-29  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Coastal ocean circulation; Nested models; West Florida continental shelf; FVCOM; Global HYCOM  
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  ISSN 1463-5003 ISBN Medium  
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Author Beaudoin, D.J.; Carmichael, C.A.; Nelson, R.K.; Reddy, C.M.; Teske, A.P.; Edgcomb, V.P. edit  url
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  Title Impact of protists on a hydrocarbon-degrading bacterial community from deep-sea Gulf of Mexico sediments: A microcosm study Type Journal Article
  Year 2014 Publication Deep Sea Research Part II: Topical Studies in Oceanography Abbreviated Journal Deep Sea Research Part II: Topical Studies in Oceanography  
  Volume Issue Pages  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Gulf of Mexico; Deep-sea; Sediment; Hydrocarbons; Grazing; Protists  
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  ISSN 0967-0645 ISBN Medium  
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Author Radovic, J.R.; Aeppli, C.; Nelson, R.K.; Jimenez, N.; Reddy, C.M.; Bayona, J.M.; Albaiges, J. edit  url
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  Title Assessment of photochemical processes in marine oil spill fingerprinting Type Journal Article
  Year 2014 Publication Marine Pollution Bulletin Abbreviated Journal Marine Pollution Bulletin  
  Volume 79 Issue 1-2 Pages 268-277  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Photooxidation; Oil spills; Oil fingerprinting; Polycyclic aromatic hydrocarbons; Triaromatic steranes  
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  ISSN 0025326X ISBN Medium  
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Author Hall, G.J.; Frysinger, G.S.; Aeppli, C.; Carmichael, C.A.; Gros, J.; Lemkau, K.L.; Nelson, R.K.; Reddy, C.M. edit  url
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  Title Oxygenated weathering products of Deepwater Horizon oil come from surprising precursors Type Journal Article
  Year 2013 Publication Marine Pollution Bulletin Abbreviated Journal Marine Pollution Bulletin  
  Volume 75 Issue 1-2 Pages 140-149  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Photo-oxidation; Biodegradation; Oxygenated hydrocarbons; Chemometrics; Partial least squares; Comprehensive two-dimensional gas chromatography  
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Author Wilson, RM; Nelson, JA; Balmer, BC; Nowacek, DP; Chanton, JP edit  url
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  Title Stable isotope variation in the northern Gulf of Mexico constrains bottlenose dolphin (Tursiops truncatus) foraging ranges Type Journal Article
  Year 2013 Publication Marine Biology Abbreviated Journal  
  Volume 160 Issue 11 Pages 2967-2980  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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Author Putland, JN; Mortazavi, B; Iverson, RL; Wise, SW edit  url
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  Title Phytoplankton Biomass and Composition in a River-Dominated Estuary During Two Summers of Contrasting River Discharge Type Journal Article
  Year 2013 Publication Estuaries and Coasts Abbreviated Journal  
  Volume Issue Oct Pages 1-16  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Phytoplankton; Biomass; Composition; Picoplankton; Salinity; Estuary  
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Author Winokur, J; Conrad, P; Sraj, I; Knio, O; Srinivasan, A; Thacker, WC; Marzouk, Y; Iskandarani, M edit  url
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  Title A priori testing of sparse adaptive polynomial chaos expansions using an ocean general circulation model database Type Journal Article
  Year 2013 Publication Computational Geosciences Abbreviated Journal Computat. Geosci.  
  Volume 17 Issue 6 Pages 899-911  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Uncertainty quantification; Polynomial chaos; Sparse Smolyak quadrature; Adaptive sampling; Ocean modeling  
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Author Rohrs, J; Christensen, KH; Hole, LR edit  url
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  Title Observation based evaluation of surface wave effects on trajectory forecasts Type Journal Article
  Year 2012 Publication Ocean Dynamics Abbreviated Journal  
  Volume 62 Issue 10-12 Pages 1519-1533  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Wave-current interactions; Trajectory forecasts; Surface drifters; iSphere; Wave effects  
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Author Ruddy, B.M.; Blakney, G.T.; Rodgers, R.P.; Hendrickson, C.L.; Marshall, A.G. edit  url
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  Title Elemental Composition Validation from Stored Waveform Inverse Fourier Transform (SWIFT) Isolation FT-ICR MS Isotopic Fine Structure Type Journal Article
  Year 2013 Publication Journal of The American Society for Mass Spectrometry Abbreviated Journal J. Am. Soc. Mass Spectrom.  
  Volume 24 Issue 10 Pages 1608-1611  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Excitation; Dynamic range; Mass spectrometry; High resolution; Isotopologue  
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  Series Volume Series Issue Edition  
  ISSN 1044-0305 ISBN Medium  
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Author Androulidakis, Y.S.; Kourafalou, V.H. edit  url
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  Title On the processes that influence the transport and fate of Mississippi waters under flooding outflow conditions Type Journal Article
  Year 2013 Publication Ocean Dynamics Abbreviated Journal Ocean Dynamics  
  Volume 63 Issue 2-3 Pages 143-164  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Mississippi River; Buoyant plume; River flood; Northern Gulf of Mexico; Numerical modeling; HYCOM  
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  ISSN 1616-7341 ISBN Medium  
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Author Sraj, I.; Iskandarani, M.; Thacker, W.C.; Srinivasan, A.; Knio, O.M. edit  url
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  Title Drag Parameter Estimation Using Gradients and Hessian from a Polynomial Chaos Model Surrogate Type Journal Article
  Year 2014 Publication Monthly Weather Review Abbreviated Journal Mon. Wea. Rev.  
  Volume 142 Issue 2 Pages 933-941  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Atmosphere-ocean interaction; Hurricanes; Ocean circulation; Bayesian methods; Inverse methods; Optimization  
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  Series Volume Series Issue Edition  
  ISSN 0027-0644 ISBN Medium  
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Author Sraj, I.; Iskandarani, M.; Srinivasan, A.; Thacker, W.C.; Winokur, J.; Alexanderian, A.; Lee, C.-Y.; Chen, S.S.; Knio, O.M. edit  url
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  Title Bayesian Inference of Drag Parameters Using AXBT Data from Typhoon Fanapi Type Journal Article
  Year 2013 Publication Monthly Weather Review Abbreviated Journal Mon. Wea. Rev.  
  Volume 141 Issue 7 Pages 2347-2367  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Atmosphere-ocean interaction; Hurricanes; Ocean circulation; Bayesian methods; Inverse methods; Statistical techniques  
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  ISSN 0027-0644 ISBN Medium  
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Author Halliwell Jr., G.R.; Srinivasan, A.; Kourafalou, V.; Yang, H.; Willey, D.; Le Hénaff, M.; Atlas, R. edit  url
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  Title Rigorous Evaluation of a Fraternal Twin Ocean OSSE System for the Open Gulf of Mexico Type Journal Article
  Year 2014 Publication Journal of Atmospheric and Oceanic Technology Abbreviated Journal J. Atmos. Oceanic Technol.  
  Volume 31 Issue 1 Pages 105-130  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Aircraft observations; Altimetry; Profilers; oceanic; Satellite observations; Data assimilation; Ocean models  
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  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0739-0572 ISBN Medium  
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Author Sturges, W.; Bozec, A. edit  url
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  Title A Puzzling Disagreement between Observations and Numerical Models in the Central Gulf of Mexico Type Journal Article
  Year 2013 Publication Journal of Physical Oceanography Abbreviated Journal J. Phys. Oceanogr.  
  Volume 43 Issue 12 Pages 2673-2681  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
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  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0022-3670 ISBN Medium  
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Author Uhlhorn, E; Shay, LK edit  url
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  Title Loop Current mixed layer response to hurricane Lili (2002) Part II: Modeling results Type Journal Article
  Year 2013 Publication Journal of Physical Oceanography Abbreviated Journal J. Phys. Oceanogr.  
  Volume 43 Issue 6 Pages 1173-1192  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Currents; Hurricanes; Atmosphere-ocean interaction; Hurricanes/typhoons; Ocean models  
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Author Maksimova, EV; Clarke, AJ edit  url
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  Title Multiyear Subinertial and Seasonal Eulerian Current Observations near the Florida Big Bend Coast Type Journal Article
  Year 2013 Publication Journal of Physical Oceanography Abbreviated Journal J. Phys. Oceanogr.  
  Volume 43 Issue 8 Pages 1691-1709  
  Deep-C Funded yes GoMRI Funding yes Peer Reviewed yes
  Keywords Coastal flows; Currents; Ocean dynamics; Shallow-water equations; Transport; Waves; oceanic  
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  Series Volume Series Issue Edition  
  ISSN 0022-3670 ISBN Medium  
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A long-term, interdisciplinary study of deep sea to coast connectivity in the northeastern Gulf of Mexico.

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